PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Lj0g3v0349249.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus
Family NAC
Protein Properties Length: 118aa    MW: 13747.6 Da    PI: 9.6441
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Lj0g3v0349249.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM113.22.8e-3539440128
              NAM  40 ykvePwdLpk..kvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                      +++ePwdL++  ++ + e++ewyfFs++dkky+tg+r+nrat++g+Wkatg+dk+++sk + lvg++ktLvfy+grap+g+k+d +mheyrl
  Lj0g3v0349249.1   3 TSIEPWDLQElcRLGSeEQNEWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKAIYSKLHDLVGMRKTLVFYEGRAPNGQKSDCIMHEYRL 94 
                      689*****954544442566***************************************999*****************************8 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100535.2421111IPR003441NAC domain
SuperFamilySSF1019412.62E-33399IPR003441NAC domain
PfamPF023655.2E-142294IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 118 aa     Download sequence    Send to blast
MLTSIEPWDL QELCRLGSEE QNEWYFFSHK DKKYPTGTRT NRATAAGFWK ATGRDKAIYS  60
KLHDLVGMRK TLVFYEGRAP NGQKSDCIMH EYRLQTNEYA TPQASFKIKN QHIVSLAR
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A3e-2829452140Stress-induced transcription factor NAC1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006421693.17e-63hypothetical protein CICLE_v100069881mg, partial
RefseqXP_009773837.11e-62PREDICTED: NAC domain-containing protein 7-like
SwissprotQ9FWX22e-57NAC7_ARATH; NAC domain-containing protein 7
TrEMBLA0A067JQX88e-65A0A067JQX8_JATCU; Uncharacterized protein
STRINGPGSC0003DMT4000555528e-62(Solanum tuberosum)
STRINGVIT_16s0022g00690.t018e-61(Vitis vinifera)
STRINGPOPTR_0012s14660.11e-60(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF126933106
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G12260.12e-48NAC 007